mri_glmfit-sim can be run in parallel. See the --help. Also, I've run a big batch of simulations and put the results here ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mult-comp-cor.tar.gz
this is for whole hemisphere on fsaverage. If that is what you are doing, then it should be fine. You just need to figure out which file is appropriate (see the README file in the directory it produces).
doug
Brendan Robert Ansell wrote:
Hi FreeSurfer users, is it possible to run FreeSurfer on parallel processors? We would like to run mri_glmfit-sim in parallel to reduce the run time. Have you any experience running FreeSurfer in parallel, or would it be relatively easy to reconfigure?
Any thoughts would be greatly appreciated.
Thanks in advance,
Brendan Ansell Melbourne University
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