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Hello FreeSurfer Developers,
I am performing an analysis of the relationship between cortical thickness and cortisol, following exactly what is on the wiki https://secure-web.cisco.com/1VtREEtXgXDhC0vSO4t4FWNu1rcpl4ibhN-xtsPTmXPjIyt... However, the uncorrected significance map for the interaction contrast is turning completely yellow (image below). [cid:aa464798-57de-4e8a-8be6-fce6a4cd9c2a] After correcting for multiple comparisons, the result is a whole-brain cluster...
I am sending the fsgd file, the matrix files (just for mri_glmfit, because I ended up deleting the analysis with mri_glmfit-sim to redo with some changes and see if it fixed the problem) and the commands.
This is what appears on the command screen after running the command for freeview. But the same things appear for images that are loading correctly.
libGL error: No matching fbConfigs or visuals found libGL error: failed to load driver: swrast libGL error: failed to load driver: swrast ls found reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/terrier_001/users/nicks/freesurfer/average/colortable_desikan_killiany.txt) colortable with 36 entries read (originally /autofs/space/terrier_001/users/nicks/freesurfer/average/colortable_desikan_killiany.txt)
What am I doing wrong?
Thanks in advance!
Laura Willers de Souza
Master Student in Biochemistry
Zimmer Lab - Federal University of Rio Grande do Sul
- Porto Alegre/RS - Brazil
