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Hi Freesurfer people,
I'm running the QDEC on schizophrenia and controls group. Some mystery error is occurring frequently. Due to this error, I'm not able to work properly. Below is the error message in italic.
Continuous Factors: Mean: StdDev: ------------------- ----- ------- Left-Lateral-Ventricle 7816.020 3727.173 Left-Inf-Lat-Vent 350.121 226.504 Left-Cerebellum-White-Matter 14621.627 2633.306 Left-Cerebellum-Cortex 53209.396 5898.023 Left-Thalamus-Proper 7482.565 1232.123 Left-Caudate 3331.808 532.262 Left-Putamen 4709.175 830.860 Left-Pallidum 1924.535 309.669 3rd-Ventricle 1229.524 408.770 4th-Ventricle 1853.426 553.034 Brain-Stem 21725.101 3957.940 Left-Hippocampus 4050.520 498.924 Left-Amygdala 1659.871 274.044 CSF 1028.790 239.493 Left-Accumbens-area 562.265 116.404 Left-VentralDC 4657.927 1037.213 Left-choroid-plexus 523.561 212.131 Right-Lateral-Ventricle 7118.300 3678.386 Right-Inf-Lat-Vent 420.917 194.063 Right-Cerebellum-White-Matter 13789.140 2276.811 Right-Cerebellum-Cortex 54513.076 5816.474 Right-Thalamus-Proper 7526.933 1477.932 Right-Caudate 3401.037 590.197 Right-Putamen 4702.361 823.977 Right-Pallidum 1860.576 304.344 Right-Hippocampus 4039.939 594.601 Right-Amygdala 1760.872 282.234 Right-Accumbens-area 522.139 114.505 Right-VentralDC 4428.377 1022.441 Right-choroid-plexus 522.657 222.093 WM-hypointensities 1709.401 4648.253 Optic-Chiasm 196.811 55.050 CC_Posterior 946.755 142.995 CC_Mid_Posterior 528.413 272.659 CC_Central 533.220 241.533 CC_Mid_Anterior 591.063 215.231 CC_Anterior 858.551 158.497 BrainSegVol 1099482.415 99478.583 BrainSegVolNotVent 1079167.296 97450.382 BrainSegVolNotVentSurf 1078648.495 97590.844 lhCortexVol 226023.502 21598.352 rhCortexVol 224689.284 22938.042 CortexVol 450712.786 43902.643 lhCerebralWhiteMatterVol 216638.257 23876.074 rhCerebralWhiteMatterVol 216556.639 24674.208 CerebralWhiteMatterVol 433296.898 48337.532 SubCortGrayVol 58400.254 6862.247 TotalGrayVol 618102.046 55580.442 SupraTentorialVol 961614.009 89842.372 SupraTentorialVolNotVent 945356.847 88183.050 SupraTentorialVolNotVentVox 942566.063 88006.239 MaskVol 1523295.056 188225.886 BrainSegVol-to-eTIV 0.792 0.054 MaskVol-to-eTIV 1.097 0.132 lhSurfaceHoles 31.176 21.318 rhSurfaceHoles 27.803 17.941 SurfaceHoles 58.979 37.649 EstimatedTotalIntraCranialVol 1394219.483 146922.169 demean_ICV -0.000 1.000 Age 30.711 6.309 scanner 0.134 0.342
Number of subjects: 142 Number of factors: 63 (2 discrete, 61 continuous) Number of classes: 4 Number of regressors: 248
Data table loading completed successfully. SUBJECTS_DIR is '/usr/local/freesurfer/subjects' *ERROR: QdecDataTable::GetFactor: '' is not in datatable!* *ERROR: QdecGlmDesign::Create: bad factor!*
I'm using linux gedit for creating qde.dat file. Is it because of gedit or something else creating the problem while copying from libre to gedit. How can I overcome this error? This is repeatedly happening and also testing my patience.
Would be great if someone helps me to get rid of this error ..!!
* Thanks & regards* *Vittal*