Hi all,
I'm currently processing a 250 µm MPRAGE with a dev build from mid of May. Running recon-all with default parameters ran flawlessly. Afterwards I added the -hires flag to process the data without conformation. However, since Saturday morning it is kind of stuck at mri_ca_label stating:
saving sequentially combined intensity scales to aseg.auto_noCCseg.label_intensities.txt
while consuming around 30 GB of memory. I ran something similar before and processing works, it's just terribly slow. Maybe this particular stage is just not very efficient as it does take a few minutes on 1 mm data only? Would it help to add the openmp flag in that case?
Best, Falk
---------------------------------------- Falk Lüsebrink, M. Sc.
Otto-von-Guericke-Universität Magdeburg Forschungscampus STIMULATE http://www.forschungscampus-stimulate.de/
Universitätsplatz 2 39106 Magdeburg
Raum: ExFa - 4.06 Telefon: 0391-67-19366 Fax: 0391-67-19347