I closely looked at the two scans having unexpected long processing time. Both them the ribbon.mgz covered not only brain but also outside the brain. One scan the lh.ribbon.mgz only covered a little bit of the cortex area. Is there any way to fix this issue?
Thanks.
Wayne
On 05/05/09 9:48 AM, "Wayne Su" wsu@interchange.ubc.ca wrote:
I re-ran over 400 scans by using Freesurfer 4.3.0 on Mac OS 10.5.6. Well, I¹m very happy on the results. Anyway there are two issues I encountered:
- I have 3 scans hanging on the last second step when creating the
aparc+aseg.mgz by using mri_aparc2aseg (more precisely is the ³labeling slice² processing) for over one week though it finally finished. The log is attached. 2) I have some scans reported ³mris_fix_topology failed! (euler number != 2)² so recon-all exited with errors. I didn¹t find there was any problem when I used the V4.0.5. I attached the log as ³recon-all2.log².
Thanks.
Wayne