16 Jan
2014
16 Jan
'14
7:46 p.m.
Hello freesurfers,
I am running into a problem during the "CA Normalize" sequence of autorecon-2. It looks like freesurfer is having a hard time creating control points based off the atlas I am using. The output is as follows:
"finding control points in <Left_Cerebral_White_Matter>...found 0 control points"
This repeated for the other various regions included in the atlas. The only control points found were "168 control points" in the "Right_Cerebral_White_Matter". Could this possibly be an alignment issue? If so, is there an easy way to check the alignment?
Thank you,
Mark