Re: [Freesurfer] fail to open .mgz data in tkmedit: DICOM image data in the sagittal view

-- On Tue, 27 Apr 2010, Bruce Fischl wrote: > Hi LJ, > > don't include the "mri" on the command line (it is assumed to be under mri) > > cheers > Bruce > On Tue, 27 Apr 2010, liyari5018 wrote: > >> hi FS experts, >> >> FS can't recognize the file which was covert from a DICOM data in >> sagital view, here is an example of failure£º >> £¨see the annex for more detail £© >> >> root@lijin-desktop:/usr/local/freesurfer/subjects/fuzhou_test# tkmedit >> bai_hong_jun mri/orig/001.mgz >> ERROR: cannot find >> /usr/local/freesurfer/subjects/fuzhou_test/bai_hong_jun/mri/mri/orig/001.mgz >> >> >> Error: Loading volume mri/orig/001.mgz >> >> Couldn't read the anatomical volume. >> >> Tkmedit couldn't read the volume you specified. >> This could be because the image format wasn't recognized, >> or it couldn't find the proper header, >> or the file(s) were unreadable, >> or it was the wrong size. >> >> how can i do to solve this problem? >> >> thanks for your reply! >> >> LJ >> >