How did you look at it (what was your command-line)? You should load it as a segmentation in tkmedit. What version of FS are you using? Older versions did not have CC defined, but it would have to be pretty old.
doug
On Tue, 8 Jun 2010, Ahmed, F, Me fahmed@sun.ac.za wrote:
Thank you for that Doug, I just had a look in the aseg.mgz file, but unless I'm blind, I can't seem to see it...could you tell me what it's labelled as please?
-----Original Message----- From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Doug Greve Sent: 08 June 2010 10:53 To: Ahmed, F, Me fahmed@sun.ac.za Cc: Freesurfer Mailing List Subject: Re: [Freesurfer] brain regions
The corpus collosum is labeld in the auotmatic volume segmenation (aseg.mgz). The prefrontal cortex is subdivided into a number of regions in the auotmatic surface parcellation (lh.aparc.annot or rh.aparc.annot)
doug
On Tue, 8 Jun 2010, Ahmed, F, Me fahmed@sun.ac.za wrote:
Hello FS experts,
A quick question, I'm looking for specific brain regions, but I can't seem to find them in the files once processing has been completed, I'm just wondering if FS does processing for areas including prefrontal cortex and corpus collosum?
Thanks, Fatima