Dear all,
I am new user of those two softwares, FSL & Freesurfer. I am trying to DISPLAY FEAT STATISTICS ON SURFACE (http://www.fmrib.ox.ac.uk/fsl/freesurfer/index.html). But in the first step, I met a big problem (attached files 1 and 2): the T1 image converted from ${SUBJECTS_DIR}/subjID/mri/T1 was different with ${FEAT_DIR}/example_func image in xyz position and orientation.
Then I ran "flirt -in example_func.hdr -ref struc_fs_T1.hdr -out func2struc.hdr -omat func2struc.mat -bins 256 -cost corratio -searchrx -180 180 -searchry -180 180 -searchrz -180 180 -dof 12 -interp trilinear", but I got a failed cogistered results (attached files 3).
Did I make some misunderstanding?
By the Way, the freesurfer website told me some command lines that transform fsl to freesurfer, but I couldn't find them, such as "reg-feat", "feat2surf". Any suggestions?
hope your helps!
best wish!
cormorent
