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1x1x3 is a no-no. The 1x1x1 FLAIR may or may not help; it’s hard to tell (especially without seeing the images!). But I would try both T1 and T1+FLAIR, and see what happens ;-)
-- Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com
From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Aaron Tanenbaum aaron.b.tanenbaum@gmail.com Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Tuesday, 25 June 2019 at 15:23 To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] T2 seq. for hippocampus ??
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Eugenio, You said the T1+T2 would be best. The T2 Nik has is not 1mm isotropic but the Flair is. Is a FLAIR in general not beneficial. Can you please elaborate.
On Tue, Jun 25, 2019 at 2:20 PM Aaron Tanenbaum <aaron.b.tanenbaum@gmail.commailto:aaron.b.tanenbaum@gmail.com> wrote: Eugenio, You said the T1+T2 would be best. The T2 Nik has is not 1mm isotropic but the Flair is. Is a FLAIR in general not benifisiol
On Fri, May 18, 2018 at 2:02 PM Anik Dar <aniqa4pm@gmail.commailto:aniqa4pm@gmail.com> wrote:
External Email - Use Caution Hi All,
I have 1x1x3 cubic mm T2 and 1x1x1 cubic mm FLAIR, in addition to 1x1x1 cubic mm MPRAGE. Can you please let me know whether I should use only T1 or should I use one of the additional seq. for hippocampal subfield segmentation ?
cheers
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