I tried the following, but the program seems to seg fault. No output files are created. Please let me know what you think I might be missing. Thank you!
mri_gtmpvc --i pet.nii.gz --seg gtmseg.mgz --reg reg.lta --o $PWD/s1
--no-reduce-fov
*mri_gtmpvc done*
mri_gtmpvc --i pet.nii.gz --seg $PWD/s1/aux/seg.nii.gz --regheader --o
$PWD/s2 --rbv *Segmentation fault (core dumped)*
On Mon, Dec 5, 2016 at 5:21 PM, Douglas N Greve greve@nmr.mgh.harvard.edu wrote:
It is not set up to do it this way, but there is a work-around. Run mri_gtmpvc without --rbv but with --no-reduce-fov, then run it again specifying the gtmpvcoutput/seg/seg.nii.gz file as the segmentation and --regheader instead of --reg.
On 12/05/2016 11:52 AM, SudEEpti wrote:
Hello,
Is there a way to save the PVC (RBV) output in native PET resolution, before upsampling?
Would you also be able to share the command that is used for upsampling? I would like to play with a different type of interpolation.
Thank you very much.
Su
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