Hi Prapti,
Normally you can use aparcstats2table exactly as you would do with thickness, given that the column corresponding to thickness values in the tablefile that you produced with your mris_anatomical_stats are indeed lgi values (i.e. you used mris_anatomical_stats -t pial_lgi -f lh.lgi.stats, which allows you to use: aparcstats2table -- subjects ...... --hemi ?h --measure thickness --tablefile ?h.lgi.stats).
Let me know if you encounter any problem,
Marie
On 16 nov. 10, at 04:28, Prapti Gautam wrote:
dear all,
I am trying to extract the mean values of lgi from the cortex from a group of subjects. I found the following command useful in extracting for one subject:
mris_anatomical_stats -mgz -f lh.lgi.stats -b -a aparc.annot -c lh.lgi.annot.ctab -t pial_lgi $SUBJECT lh
However, I have a lot of subjects I wish to extract this for and I was wondering if there is a command that will extract these values similar to the aparcstats2table command (where all the subjects and the mean values for each parcellation is in one output file)
thanks,
Prapti
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