I think think that will quite work. You can use mri_convert to left/right swap all the volumes then rerun the surface generation I guess (autorecon2-wm and autorecon3 I think would do it)
On Thu, 6 Sep 2007, Pedro Paulo Oliveira Jr wrote:
I think you can:
rename the lh.* files to xx.*
rename the rh.* files to lh.*
rename the xx.* files to rh.*
From: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] On Behalf Of Inês Souta Sent: quinta-feira, 6 de setembro de 2007 12:22 To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] Switch hemispheres
Hi,
After processing the hole image I realized that the orientation of the original .mgz file was wrong and I've ended up with switched hemispheres. The right hemisphere is where the left should be, and vice-versa. Otherwise the orientation is right. Since I've already made manual edits, is the anyway of switching hemispheres without having to re-process the hole image again?
Thanks,
Ines