[Freesurfer] Freesurfer6.0 failure

Hello, I allow myself to send you this mail in order to have some informations. we have a problem concerning the segmentation of FREESURFER6.0 Indeed for T1image of one subject, the surface segmentation(figure1) is accurate but there is failure on the cortical segmentation(figure2) of the right hemisphere for the free surfer 6.0. For that subject, we relaunched the free surfer6.0 , but still the same problem. Here is the command we used to relaunch the free surfer6.0 for that subject: recon-all -all -FLAIR FLAIR/FLAIR_585.nii.gz -i T1/T1_585.nii.gz -brainstem-structures -3T -contrasurfreg -qcache -subjid SHARE0585_2 -sd /scratch/alaurent006/freesurfer_end -FLAIRpial

What can we do about it?

Thanks