Hi Freesurfers,
My experimental design includes 3 discrete factors and 1 continuous variables:
Discrete factors: diagnosis with two levels (A, B); genotype with two levels (G, T); gender (F, M)
Continuous variable: age
So I can get 8 classes: AGF, AGM, ATF,ATM, BGF, BGM, BTF, BTM. Then I want to perform 2 (diagnosis)* 2(genotype) interaction analysis with regressing out the effect of gender and age. Is the following contrast matrix correct?
0.25 0.25 -0.25 -0.25 -0.25 -0.25 0.25 0.25 0 0 0 0 0 0 0 0
0 0 0 0 0 0 0 0 0.25 0.25 -0.25 -0.25 -0.25 -0.25 0.25 0.25
Any help will be very appreciated.
Best wishes,
Meng