Dear Freesurfers,
I ran a Monte Carlo analysis to identify significant clusters of activated voxels in a between-group comparison of fMRI data I've collected.
I was wondering if there was any way to limit what tksurfer displays to only the significant clusters based on the Monte Carlo -- i.e., those with a corrected cluster wise p < .05.
I know that you can display those clusters using the sig.cluster.mgh image file that is generated with the Monte Carlo analysis. But, the blobs in that map dont have any color variation and don't look the same way that activation does when typically using sig.nii (i.e., some are all yellow, orange or red).
Any help or suggestions would be much appreciated.
Thanks!
Ben Benjamin Brent, M.D., M.S. Massachusetts Mental Health Center 75 Fenwood Road, Room 618 Boston, MA 02115 617-754-1262
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