Re: [Freesurfer] bvecs error from Tracula

Thanks Anastasia, IT HELPED!

On Tue, Jul 16, 2013 at 5:25 PM, Anastasia Yendiki < ayendiki@nmr.mgh.harvard.edu> wrote:

Hi Amirhossein - I'm attaching sample files.

a.y

On Tue, 16 Jul 2013, amirhossein manzouri wrote:

Hi Anastasia,

...

I have tried both , 3-row and 3-column format and still wrong bvecc and bval from flip4fsl. Could you please send me a sample of your original files so I can compare?

On Mon, Jul 15, 2013 at 7:44 PM, Anastasia Yendiki ayendiki@nmr.mgh.harvard.edu wrote:

  Hi Amirhossein - Are your original bvecs/bvals in 3-row format
  instead of 3-column format?
  http://surfer.nmr.mgh.harvard.**edu/fswiki/FsTutorial/Tracula<http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Tracula>

  Thanks,
  a.y

  On Mon, 15 Jul 2013, amirhossein manzouri wrote:

        Dear Experts,
        I am running trac-all -prep -c dmrirc on my DWI
        data. After flip4fsl step I get the attached bval
        and bvec file which the bvec one is wrong so the
        process exits
        with error in dtifit. I have also attached  original
        bvec and bval.

        --
        Best regards,
        Amirhossein Manzouri

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-- Best regards, Amirhossein Manzouri