Re: [Freesurfer] Talairach afd error

Hi Hiroyuki,

can you check to make sure that the direction cosines are correct? Bring up the orig.mgz and make sure that coronal is coronal, sagittal is sagittal and horizontal is horizontal. Did this data go through analyze at any time?

cheers Bruce

On Fri, 3 Sep 2010, Oya, Hiroyuki wrote:

Dear all,

recon-all failed at the talairach stage.

ERROR: talairach_afd: Talairach Transform: transforms/talairach.xfm ***FAILED*** (p=0.0000, pval=0.0000 < threshold=0.0050) Linux hiroyuki-desktop 2.6.32-24-generic #42-Ubuntu SMP Fri Aug 20 14:21:58 UTC 2010 x86_64 GNU/Linux

In what circumstances do we see this? T1 STRUCTURAL looks OK . Any comment would be appreciated.

Hiroyuki