What is your command line and terminal output?
On 4/24/2021 8:36 PM, Haneen Hakeem wrote:
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*/Hello FreeSurfer Developers,/* */ /* */I’m attempting to output stat files using “asegstats2table” and “aparcstats2table” but for some of my subjects I get the following error when I run the commands: /* */ /* */ERROR: Cannot find stats file /apps/freesurfer/7.0.0/freesurfer/subjects/APC011/stats/aseg.stats/* */ /* */However, when I check the stats file in FreeSurfer output directory, the stats files are there (including asset.stats). This issue is recurring with all “asegstats2table” and “aparcstats2table” stat files. /* */ /* */1) freesurfer version FreeSurfer 7.0/* */2) Platform: Bash remotely through High Performance Computing (HPC) on a MacOS Mojave/* */3) recon all log attached/*