31 Jul
2013
31 Jul
'13
10:03 a.m.
Dear Freesurfer experts,
I am running recon-all on child brains and I am have an issue with one brain. One entire temporal gyrus is being excluded from the white matter boundary line. I have entered control points and rerun recon-all using autorecon2-cp. This added the desired white matter to wm.mgz: see attached photo.
But as you can see it does not recognize it as white matter and/or create the correct white matter boundary/ pial surface.
Any ideas?
Sincerely, Alexarae
