Re: [Freesurfer] Setting the origin in native space

Hi Ryan

I think mri_convert -at <tal xform> <input vol> <output vol>

should do the trick.

cheers Bruce

On Wed, 19 Dec 2018, Nillo, Ryan Michael R wrote:

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Hello FreeSurfer users,

I want to use the suit software to segment the cerebellum, however the software requires the origin be set at the anterior composure. I know the Talairach image’s origin is set at the anterior commisure and that there is a Talairach transformation in mri/transforms. Is there a way to use this information to set the origin to the anterior commisure in the native space image?

Thanks in advance, Ryan Nillo Staff Research Associate UCSF Department of Radiology and Biomedical Imaging

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