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Hi there,
I'm using this version of Freesurfer: freesurfer-linux-centos8_x86_64-7.4.1-20230613-7eb8460
I'm using mc-sess to run motion correction on some functional task and resting state data. I would like to perform censoring on high motion timepoints in order to reduce spurious correlations due to movement during connectivity analysis. My main question is: does mc-sess include censoring? If so, what are the threshold parameters? If not, are there any optional arguments to turn censoring on? If not, how do you recommend doing motion correction with censoring using Freesurfer? I know mc-sess uses AFNI's motion correction, just not sure if it utilizes censoring.
Thank you, Tom