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Dear Eugenio,
thanks for your response. I wasn't sure whether .mgz files contain patient information so I had to clarify that. It would be great if you could take a look on the affected cases. I could send you norm.mgz files of one or more subjects. Can I send them directly via email or do you prefer dropbox? Thanks again!
Best regards, Franziska
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Message: 17
Date: Tue, 23 Feb 2021 16:20:43 +0000
From: "Iglesias Gonzalez, Juan E." JIGLESIASGONZALEZ@mgh.harvard.edu
Subject: Re: [Freesurfer] Thalamic nuclei segmentation - PuM nucleus mis-segmentation?
To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu
Message-ID: 1F81BC20-3BA0-4A5B-B507-13EED2BEE374@mgh.harvard.edu
Content-Type: text/plain; charset="utf-8"
Sure! The more slices the better __
Maybe it would be possible to share norm.mgz (which is skull stripped and thus deidentified) and the segmentation? Or maybe even crop norm.mgz around the thalami with Freeview?
Cheers,
/E
Juan Eugenio Iglesias
Senior research fellow
CMIC (UCL), MGH (HMS) and CSAIL (MIT)
http://secure-web.cisco.com/11XaMU-QoiZKnXiNuQPJicEtr4gYDxjHq1ZrbybgK3HfB2JN...
?On 2/23/21, 11:00, "freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Gronow, Franziska" <freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Franziska.Gronow@uniklinikum-dresden.de> wrote:
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Dear Eugenio,
thank you for your response. Unfortunately it is not possible to share the whole subject. Would it be helpful to send you more screenshots of all three views (coronal, sagittal, axial) with different mask opacities?
Kind regards,
Franziska