6 Jul
2016
6 Jul
'16
11:25 a.m.
Hi All,
We have run recon-all on T1 FLASH images have identified regions where the sulci were included inside the white matter boundary. We added controls points around the sulci (please see attached pic) and reran recon-all as follows
recon-all -autorecon2-cp -autorecon3 -subjid <subject>
but on a lot of instances, the specified control points were not incorporated (please see attached image). How do we fix this, now that we have already run the recon-all with -autorecon2-cp and the error persists ?
Can someone please suggest ?
Thank you,
Rito and Jack
