External Email - Use Caution
Hi Stacey,
aren't participant IDs already anonymized or at least pseudonymized? In any case, if that ID is part of the file name, you should delete or change the recon-all.cmd, recon-all.done, recon-all.log files as the input file name is written in it.
Besides, you should remove any image files that were created before brainmask.mgz was produced. In case of v7, these should be: all files in ./mri/orig/, rawavg.mgz, orig.mgz, orig_nu.mgz, nu.mgz, and T1.mgz
Best, Falk
________________________________ Von: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu im Auftrag von STACEY M SCHAEFER stacey.schaefer@wisc.edu Gesendet: Donnerstag, 28. Januar 2021 16:46:56 An: freesurfer@nmr.mgh.harvard.edu Betreff: [Freesurfer] data sharing of freesurfer processed data
External Email - Use Caution
Does the freesurfer group have any recommendations or procedures for public sharing data that has been processed with freesurfer? In particular, procedures to automatically swap out participant IDs to anonymize the data?
Stacey M. Schaefer, Ph.D. Center for Healthy Minds
University of Wisconsin-Madison
625 W Washington Ave
Madison WI 53703