Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions Fedora 19 - Freesurfer 5.1

Hi Bruce.

Thanks so much for the offer of help. I would really appreciate it. If you can send me the files and then let me know what I need to capture I'll try it out.

Thanks. -John

Sent from my Windows Phone ________________________________ From: Bruce Fischlmailto:fischl@nmr.mgh.harvard.edu Sent: ‎4/‎25/‎2014 11:38 PM To: Freesurfer support listmailto:freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Segmentatoin fault using Freesurfer Functions Fedora 19 - Freesurfer 5.1

Hi John

we could give you a version with debugging info and source and you could run it in gdb and find out where it is crashing. Or you could send us the core fie from a version with debugging on

cheers Bruce

On Fri, 25 Apr 2014, West, John D. wrote:

Hello.

We are trying to get Freesurfer 5.1 to work on Fedora 19. The functions we have tried show the help menu successfully when asked, but run into a Segmentation Fault when trying to process anything. Both tkmedit and mri_convert have shown this behavior. Segmentation Faults are notoriously hard to track down, but do you have any suggestions as to what may be causing this? This version of freesurfer seems to work fine on fedora 17 and older.

We are using the CentOS4 x86_64 version of Freesurfer 5.1.

Thanks.

-John West

Systems Administrator

IU Center for Neuroimaging