you have to use -per-run not -per-session
On 03/03/2016 12:27 PM, Ji Won Bang wrote:
The command I used is:
mktemplate-sess -s $SUBJECT -df sessdirfile -fsd bold_retino
mc-sess -s $SUBJECT -df sessdirfile -fsd bold_retino -per-session
Thank you.
Best, Ji Won
2016-03-03 12:22 GMT-05:00 Ji Won Bang <kirstens03@gmail.com mailto:kirstens03@gmail.com>:
Dear. freesurfer experts. Hi. I'm using freesurfer version 5.3.0. I tried mc-sess onto runs that have different number of slices. However, due to this different number of slices in different runs, mc-sess gives an error. I expected that running mc-sess in freesurfer version 5.3.0 would handle this issue. If you can share your idea to fix this problem, that would be a great help. Thank you! Best, Ji Won
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer