Hi Danny,
you're probably better off just editing the recon-all script to change the names of these files.
cheers, Bruce On Mon, 31 May 2010, Danny Kim wrote:
Hi all,
I was wondering if there are flags you can specify to use your own .tif and .gcs files in -autorecon3 processing pipeline.
Currently, I am calling up individual processes to double check the results, but in the long run it would be useful to just automate this.
Thanks
Danny,