Hi, I've just started to look at fs-fast for analyzing data and was following along with the tutorial data using the fs-fast documentation from the website. My problem arises when I try to view the data with tkmedit:
tkmedit-sess -sf sessid -df sesspar -a sem_assoc -c omnibus -map fsig
-------------------------------------------------------------- tkmedit-sess logfile is /data/freesurfer/scratch/bert/log/tkmedit-sess.log -------------------------------------------------------------- INFO: Found session in: /data/freesurfer/Sessions//bert-functional INFO: Found session in: /data/freesurfer/Sessions//bert-functional ERROR: cannot find /data/freesurfer/scratch/bert//data/freesurfer/Sessions//bert-functional/bold/register.dat
I don't understand why it's adding the current directory to the beginning of the path where it should be looking for the register.dat file. The path should just be /data/freesurfer/Sessions//bert-functional/bold/register.dat, where the registration file is located.
Any thoughts?
Also, as a side note... has the tutorial data been updated since the documentation was made? Because following alone with exactly the commands given in the documentation does not yield the same visual results for me as the example images.
-Mike