Dear surfers,
For several subjects recon-all created a binary brainmask and binary T1.mgz image. Recon-all finished successfully for these subjects and the nu.mgz file looks fine. I have attached a screenshot of what it looks like when I open Freeview.
This only happened for 7/82 subjects. Any ideas what might be the issue?
Thank you in advance for your thoughts, Emily
[image: Inline image 1]