13 Jan
2012
13 Jan
'12
12:36 p.m.
Hello,
I am trying to train a cerebellar atlas based on 20 manually parcellated cerebellums. I have run the anatomical through freesurfer. When I try to load the overlay (parcellation) in tkmedit, the underlay (e.g., orig.mgz, T1.mgz) and the overlay (the parcellation) are no longer in alignment.
However, loaded in AFNI the underlay and overlay of course align. Is there a quick fix to get them in alignment?
Anthony
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Anthony Steven Dick, Ph.D.
Assistant Professor
Department of Psychology
Florida International University
Modesto A. Maidique Campus DM 296B
11200 S.W. 8th Street
Miami, FL 33199
Phone: 305-348-4202 (try this first)
Lab Phone: 305-348-9057 or 305-348-9055
Fax: 305-348-3879
Email: adick@fiu.edu
Webpage: http://www.fiu.edu/~adick