3 Nov
2014
3 Nov
'14
5:35 p.m.
Hi Christina
it's tough to tell from just a single image, but it looks to me like you are missing a bunch of white matter. Can you tell us more about the scan?
The typical way you would fix this is by setting some thresholds in mris_make_surfaces using the expert options. Probably max_csf should be lower. If you upload the subject we will take a look
cheers Bruce
On Mon, 3 Nov 2014, Christina Chen wrote:
Hi,
Are there any ways to fix underinclusion of gray matter cortical edges when the white matter is fine? Attached is a picture.
Thanks, Christina