24 Jan
2012
24 Jan
'12
7:49 p.m.
You can use mri_binarize, something like
mri_binarize --i sig.mgh --min 3 --o mask.mgh
Note that sig.mgh is a signed quantity. If you want it unsigned, then use --abs above
doug
Miranka Wirth wrote:
Dear Freesurfers,
I would to like to generate a binary surface-based mask from the GLM output file (e.g., sig.mgh) the way that vertices above a certain p threshold are set to 1 and below this threshold to 0. I believe I can use this mask in the mri_glmfit procedure?
Thank you for helpful information Miranka _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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Douglas N. Greve, Ph.D.
MGH-NMR Center
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