Re: [Freesurfer] Error during processing data. mris_make_surfaces malloc: *** error for object 0x2431900024317: pointer being freed was not allocated.

Are you running out of memory on the machine? If not, and you upload the entire subject dir we will see if we can replicate and fix this problem.

cheers Bruce On Tue, 24 Sep 2019, Троицкий Антон Александрович wrote:

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Hello FreeSurfer Developers,

during the processing of patient data an error occurred. I don’t clearly understand a reason for this error. Technical description of this error is

mris_make_surfaces(10174,0x7fffbf9553c0) malloc: *** error for object 0x2431900024317: pointer being freed was not allocated *** set a breakpoint in malloc_error_break to debug 000: dt: 0.0000, sse=991989.1, rms=2.913 021: dt: 0.5000, sse=841468.7, rms=1.605 (44.916%) 022: dt: 0.5000, sse=803776.9, rms=1.267 (21.055%) rms = 1.24, time step reduction 1 of 3 to 0.250... 023: dt: 0.5000, sse=793308.4, rms=1.242 (1.982%) Abort

My suggestion is that the error associated with memory allocation and its reading.

Is there any suggestion about why it happened and how can I prevent it in the future?

Also, I've attached the recon-all.log in case it's of any use.

1. FreeSurfer version: freesurfer-Darwin-OSX-stable-pub-v6.0.0
2. Platform: macOS Sierra 10.12.6
3. uname -a: Darwin mac-2ap023-2.fccho-moscow.ru 16.7.0 Darwin Kernel Version 16.7.0: Thu Jan 11 22:59:40 PST 2018; root:xnu-3789.73.8~1/RELEASE_X86_64 x86_64
4. recon-all.log: see attached