Dear fellow FreeSurfer users,
My jobs fail at the the last mri_label2label step of -autorecon3, and I cannot figure out why. Any help or input would be greatly appreciated.
I am attaching a recon-all log for two of these subjects. The error says that it's not possible to read the labels contained in the fsaverage/labels/ folder. These labels/files do exist however if you look in the /labels/ folder.
I'm using Centos 6.7 (Final) Kernel Linux 2.6.32-573.22.1.el6.x86_64 GNOME 2.28.2 My username is fdu0.
A path to my most recent error fail can be the following: /autofs/cluster/sperling/Centiloid_New/50-70_Data/FreeSurferProc/AD01 (PBS Job ID: 11918069)
another one with this same error fail is /FreeSurferProc/AD08 (PBS Job ID: 11914847).
Thank you very much for your time and any help you may be able to provide.
Fred