after autorecon3 look at the two .annot files and see if they seem accurate. If so, then the spherical morph worked.
cheers, Bruce On Mon, 13 Apr 2009, karlkarl wrote:
Hello, freesurfer experts
We are doing the structure scan on the adolescents. One potential problem is the head movement from the participants. But so far from the image, it looks ok.
The question is
1 What is the visual check after autorecon3? We did the visual check after autorecon1 and autorecon2 to examine the skull stripping and pial/white surface.
2 Even freefurfer finished without error after all the recon-all steps, does it mean the data is of good quality. Is there any way in freesurfer to do a quality assessment of the image?
Thanks a lot! _________________________________________________________________ Live SearchÊÓƵËÑË÷£¬¿ìËÙ¼ìË÷ÊÓƵµÄÀûÆ÷£¡ http://www.live.com/?scope=video