Hi Kathy, there is not an easy way to do this. The closest thing you could do would be to create an annotation with those 3 colors based on the thresholded sig maps. Let me know if you want instructions to do this. doug
On 05/02/2012 10:51 AM, keepmoon wrote:
Dear all,
I search my question before I post it. I did find similar questions, but didn't find answer. I want to overlay two files with different colors. For example, one is sig1.mgh from cortical thickness, the other is sig2.mgh from area. I want to use tksurfer overlaying them with three colors: red is significant regions of thickness; blue is significant regions of area; green is overlap significant regions of thickness and area.
I tried to use the following command:
tksurfer fsaverage lh inflated -annot aparc.annot -fthresh 2 -overlay sig1.mgh -overlay sig2.mgh
It just can display sig1.mgh or sig2.mgh, but can't display two together. In addition, I don't know how to control overlap and other regions color.
Anyone knows how to do this?
Any help will be appreciated!
Thanks in advance!
Kathy
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