Re: [Freesurfer] extract morphology data

What is your command line and full terminal output?

On 9/24/2020 4:30 AM, 姜黎黎 wrote:

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Hello,

I am Lili Jiang from Institute of Psychology Chinese Academy of
Sciences. I used freesurfer to do MRI  data analysis. When I used
mri_preproc to extract morphology data, I always got log file
writing 'Reading source surface reg
~/sub001/surf/rh.fsaverage5.sphere.reg
No such file or directory
mri_surf2surf: could not read surface
~/sub001/surf/rh.fsaverage6.sphere.reg
No such file or directory'. It seemed that mri_surf2surf loaded by
mris_preproc always wanted to load reg file with 'fsaverage5'. But
when I extrated morphology data in the resolution of fsaverage,
then everything went well. Could you tell me what's wrong with this?

ps. I just upgraded freesurfer to v6.0 last summer.


Best,

Lili



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