Re: [Freesurfer] --conform option

Hi Stefano,

the --conform does several things to the input volume to put it into a format we expect. If you bring it up in tkmedit and it properly shows you the various directions (e.g. the "coronal" view is indeed coronal) then you should be fine.

Bruce On Thu, 23 Mar 2006, Pellegrini, Stefano (NIH/NINDS) [F] wrote:

Hi everybody,

can anybody explain to me why when I use mri_convert with the --conform option with an input volume RAS oriented (let's say it is raw_mean.mgz) I get as output a volume LIA oriented (let's say it is orig.mgz)? is that ok? thanks,

 -stefano

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