External Email - Use Caution
Have you tried running freeview from the command line after setting up the environment?
- R.
$ export FREESURFER_HOME=/Applications/freesurfer/8.0.0-beta
$ source $FREESURFER_HOME/SetUpFreeSurfer.sh .... then try running freeview without any arguments to check it opens an empty window ...
$ freeview
On 2/7/25 14:24, Sahil Bajaj (sahil.brain@gmail.com) wrote:
External Email - Use Caution Greetings, I am trying to use the latest FreeSurfer version 8.0 (beta version) on my Mac Book Pro. But somehow I am struggling to resolve the following issue when I try to open FreeView. When I checked the FreeSurfer directory - I can see that /Applications/freesurfer/bin/freeview exists but /Applications/freesurfer/Freeview.app/Contents/MacOS/freeview: does not exist.. Any help would be greatly appreciated. Best, Sahil
sbajaj@XJ6RDJF6Y9 ~ % export FREESURFER_HOME=/Applications/freesurfer
source $FREESURFER_HOME/SetUpFreeSurfer.sh
-------- freesurfer-macOS-darwin_arm64-8.0.0-beta-20241103-b8aacdc --------
Setting up environment for FreeSurfer/FS-FAST (and FSL)
FREESURFER_HOME /Applications/freesurfer
FSFAST_HOME /Applications/freesurfer/fsfast
FSF_OUTPUT_FORMAT nii.gz
SUBJECTS_DIR /Applications/freesurfer/subjects
MNI_DIR /Applications/freesurfer/mni
FSL_DIR /Users/sbajaj/fsl
sbajaj@XJ6RDJF6Y9 ~ % freeview &
[1] 15056
/Applications/freesurfer/bin/freeview: line 2: /Applications/freesurfer/Freeview.app/Contents/MacOS/freeview: No such file or directory
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