the colors are specified in $FREESURFER_HOME/Simple_surface_labels2002.txt
cheers, Bruce
On Tue, 22 Mar 2005, Wan Park wrote:
Thanks Xiao Han! I worked finally! Cheers (see below)
Now I have this question: I see there is a lot of regions. How do each region correspond to specific color in the visualization? Thanks a lot!
Wan
total white matter volume = 533145 mm^3
table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard error (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name
2955 1803 6322 3.453 +- 0.875 0.204 0.080 71.570 9.042 G_parietal_inferior-Angular_part 3572 2241 6032 2.691 +- 0.894 0.192 0.060 59.096 9.520 S_intraparietal-and_Parietal_transverse 2379 1388 3665 2.599 +- 0.657 0.190 0.060 58.310 6.513 G_parietal_superior 1269 713 1901 2.621 +- 1.066 0.208 0.087 33.729 5.435 G_occipital_middle 824 464 1105 2.449 +- 1.013 0.159 0.057 14.657 1.930 S_occipital_superior_and_transversalis 5746 3588 9688 2.721 +- 0.785 0.153 0.043 60.049 8.714 S_temporal_superior 3950 2272 5219 2.285 +- 0.617 0.183 0.060 74.201 8.967 G_precentral 3509 1947 5172 2.636 +- 0.791 0.193 0.078 291.730 9.736 G_postcentral 4558 2846 6608 2.321 +- 0.553 0.170 0.043 54.653 7.641 S_central 3180 1931 5328 2.757 +- 0.611 0.147 0.037 30.201 4.109 S_postcentral 2393 1395 2388 1.717 +- 0.559 0.225 0.074 58.455 7.835 G_paracentral 465 248 684 2.720 +- 0.584 0.138 0.040 5.397 1.079 S_intermedius_primus-Jensen 2626 1508 3646 2.381 +- 0.738 0.158 0.047 37.750 4.537 G_precuneus 2486 1441 3440 2.371 +- 0.824 0.214 0.088 68.986 9.620 Pole_occipital 1150 831 1277 1.559 +- 0.531 0.201 0.059 13.629 3.664 G_occipital_superior 1045 613 1346 2.158 +- 0.733 0.191 0.069 20.900 2.763 G_occipital_inferior 2403 1278 3600 2.793 +- 0.657 0.182 0.067 52.261 6.180 G_temporal_middle 1531 921 2238 2.456 +- 0.524 0.197 0.055 26.134 2.962 S_precentral-Superior-part 1747 926 2300 2.469 +- 0.746 0.165 0.065 26.462 4.279 G_parietal_inferior-Supramarginal_part 788 441 1023 2.287 +- 0.956 0.205 0.097 16.175 3.575 S_occipital_middle_and_Lunatus 1694 924 1989 2.253 +- 0.946 0.204 0.087 47.149 7.090 G_cuneus 301 118 243 2.046 +- 0.736 0.140 0.059 4.324 0.713 S_occipital_inferior 770 453 1140 2.513 +- 0.520 0.162 0.041 8.611 1.256 S_occipital_anterior 8169 4643 9060 1.971 +- 0.606 0.185 0.061 142.550 19.432 G_frontal_superior 806 483 904 1.868 +- 0.652 0.170 0.054 11.111 1.823 S_cingulate-Marginalis_part 761 454 869 1.961 +- 0.665 0.145 0.037 7.589 0.992 S_subparietal 2634 1496 3645 2.456 +- 0.629 0.205 0.076 62.685 6.930 G_temporal_inferior 385 173 500 2.845 +- 0.535 0.133 0.041 4.932 0.410 G_temp_sup-Planum_tempolale 946 577 1356 2.365 +- 0.443 0.172 0.040 9.745 1.653 S_temporal_inferior 2556 1766 2644 1.539 +- 0.548 0.174 0.045 35.471 6.396 S_parieto_occipital 1608 945 2243 2.355 +- 0.613 0.154 0.035 12.523 2.516 Lat_Fissure-post_sgt 2976 1816 4799 2.656 +- 0.539 0.209 0.061 67.117 7.108 G_occipit-temp_lat-Or_fusiform 91 42 56 1.341 +- 0.194 0.141 0.026 0.851 0.105 S_paracentral 2519 1720 3436 2.049 +- 1.045 0.152 0.040 26.893 5.123 S_calcarine 365 212 345 1.644 +- 0.419 0.128 0.015 2.299 0.248 S_collateral_transverse_post 1247 714 1541 2.183 +- 0.494 0.165 0.036 12.002 2.265 S_occipito-temporal_lateral 3489 2058 3863 1.885 +- 0.594 0.175 0.049 48.747 6.589 S_cingulate-Main_part 1792 1174 2649 2.327 +- 1.109 0.179 0.041 38.026 2.807 G_occipit-temp_med-Lingual_part 1340 746 1715 2.317 +- 0.546 0.177 0.061 22.078 3.527 G_temp_sup-Lateral_aspect 3040 1843 3431 1.874 +- 0.487 0.147 0.031 28.439 3.845 S_frontal_superior 1638 893 2173 2.380 +- 0.695 0.159 0.045 24.985 3.034 G_cingulate-Main_part 637 336 867 2.556 +- 0.682 0.171 0.064 14.747 1.730 G_subcentral 214 102 226 2.234 +- 0.679 0.080 0.017 0.636 0.115 S_subcentral_post 1509 817 2192 2.657 +- 0.733 0.162 0.058 26.524 3.281 G_temp_sup-G_temp_transv_and_interm_S 811 432 1032 2.336 +- 0.799 0.143 0.041 10.138 1.131 S_pericallosal 1438 720 1688 2.373 +- 0.619 0.127 0.050 16.264 2.842 G_temp_sup-Planum_polare 1561 943 2367 2.519 +- 0.422 0.151 0.040 15.352 2.301 S_occipito-temporal_medial_and_S_Lingual 324 179 458 2.554 +- 0.547 0.142 0.030 2.692 0.407 S_temporal_transverse 2501 1428 3976 2.759 +- 0.632 0.189 0.064 51.645 5.402 G_frontal_middle 1838 1103 2580 2.352 +- 0.577 0.137 0.033 16.472 2.179 S_precentral-Inferior-part 1465 878 1891 2.281 +- 0.919 0.162 0.034 22.944 2.086 Corpus_callosum 1869 1067 2386 2.221 +- 0.616 0.162 0.046 19.322 3.634 S_circular_insula_inferior 1542 925 1887 2.019 +- 0.616 0.153 0.037 14.490 2.201 S_circular_insula_superior 620 297 514 1.822 +- 0.563 0.136 0.035 5.491 0.970 G_insular_long 125 67 179 2.627 +- 0.384 0.182 0.041 1.293 0.295 S_subcentral_ant 1126 623 1797 2.751 +- 0.840 0.201 0.091 27.892 3.360 G_frontal_inf-Opercular_part 22 3 6 2.114 +- 0.520 0.016 0.003 0.017 0.001 S_central_insula 1526 892 1823 2.055 +- 0.564 0.151 0.033 16.765 1.989 S_frontal_inferior 154 100 100 1.014 +- 0.401 0.170 0.030 2.377 0.311 G_cingulate-Isthmus 1101 659 1437 2.197 +- 0.487 0.145 0.030 9.574 1.225 S_collateral_transverse_ant 9783 5994 14723 2.464 +- 0.678 0.169 0.053 146.050 22.466 Medial_wall 609 347 534 1.588 +- 0.504 0.171 0.039 6.182 1.180 G_insular_short 1950 1162 2269 1.976 +- 0.512 0.155 0.036 20.872 2.707 S_frontal_middle 2142 1215 3287 2.720 +- 0.600 0.159 0.042 28.728 3.325 G_occipit-temp_med-Parahippocampal_part 310 187 305 1.653 +- 0.432 0.163 0.028 2.810 0.416 Lat_Fissure-ant_sgt-ramus_vertical 494 285 413 1.465 +- 0.372 0.194 0.054 7.790 1.015 S_circular_insula_anterior 1236 616 1408 2.334 +- 0.607 0.150 0.058 20.536 3.161 Pole_temporal 708 341 714 2.147 +- 0.669 0.150 0.058 12.349 1.376 G_frontal_inf-Triangular_part 204 107 146 1.415 +- 0.418 0.134 0.023 1.496 0.247 Lat_Fissure-ant_sgt-ramus_horizontal 357 194 354 1.958 +- 0.632 0.126 0.024 2.739 0.341 S_orbital_lateral 359 172 355 2.047 +- 0.863 0.136 0.036 3.476 0.458 G_frontal_inf-Orbital_part 111 52 111 2.118 +- 0.400 0.117 0.019 0.665 0.106 S_transverse_frontopolar 1842 979 1604 1.697 +- 0.602 0.141 0.034 16.881 2.657 G_orbital 1129 774 1026 1.316 +- 0.250 0.161 0.035 9.832 1.784 S_orbital-H_shapped 8 1 3 1.951 +- 0.187 0.035 0.004 0.008 0.002 S_intracingulate 164 87 188 2.121 +- 0.423 0.162 0.054 2.308 0.243 S_frontomarginal 694 360 870 2.434 +- 0.484 0.160 0.066 14.935 1.792 G_transverse_frontopolar 279 138 262 2.008 +- 0.469 0.132 0.033 2.265 0.478 G_frontomarginal 244 119 228 1.988 +- 0.678 0.124 0.043 2.159 0.438 S_suborbital 348 204 339 1.614 +- 0.405 0.151 0.038 3.816 0.537 S_orbital_medial-Or_olfactory 374 201 336 1.636 +- 0.466 0.149 0.039 3.158 0.567 G_rectus 127 47 119 2.493 +- 0.826 0.111 0.035 0.737 0.225 G_subcallosal [ogden:freesurfer_package/freesurfer/subjects] wpark%