That looks pretty awful. You should check the orig.nofix surfaces. I bet your data is extremely noisy
On 2/28/19 11:37 AM, Miguel Ángel Rivas Fernández wrote:
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Dear Freesurfer devs,
I ran the recon-all in one subject and and this process was stopped in the topology correction. In particular during the "CORRECTING DEFECT 36 (vertices=19847, convex hull=5892, v0=94733)". I reviewed the lh.inflated.nofix and the lh.orig.nofix files in Freeview and I noticed that the this error would be located in the lh.inflated.nofix file. How can I fix this problem?
I sent to you a screenshot of the lh.inflated.nofix file as well as the recon-all.log file if you want take a look.
Best regards,
-- *Miguel Ángel Rivas Fernández*
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