Hi, yes thank you both. That is exactly what the problem was.
Laura
On Tue, Dec 10, 2013 at 11:12 AM, Douglas N Greve <greve@nmr.mgh.harvard.edu
wrote:
Yep, looks like your annot is out of sync with the surfaces
On 12/10/2013 01:51 PM, Chris Watson wrote:
I've seen this happen after making manual edits and then not finishing a re-run of recon-all. Chris
On 12/10/2013 02:00 PM, Laura Taylor wrote:
Hi,
I'm trying to load lh.aparc.a2009s.annot onto the lh pial surface of a subject. When I use the freeview gui and select lh.aparc.a2009s.annot under the annotations menu a strange multicolored surface is loaded. It looks like something that has been tie-dyed and not like the examples of parcellation that are shown on some of the freesurfer pages.
I have attached a screenshot of the output that I get.
Any help would be appreciated.
Thank you,
Laura
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom
it is
addressed. If you believe this e-mail was sent to you in error and the
contains patient information, please contact the Partners Compliance
HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to
you in error
but does not contain patient information, please contact the sender and
properly
dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer