28 May
2009
28 May
'09
7:31 a.m.
Hi Falk,
On Thursday 28 May 2009 11:56:51 Falk Lüsebrink wrote:
Hello,
Im having trouble to generate a correct aseg.mgz for one volume of mine. The nu_noneck.mgz is also incorrect and therefore I think the -careg stage of autorecon2 might fail. Is there a way to do some kind quality check, like the tal-check during autorecon1, to see whether the talairach.m3z is incorrect? Are there some kind of instructions like fixing the bad output from the talairach registration?
For this you can follow instruction on
http://surfer.nmr.mgh.harvard.edu/fswiki/RecommendedReconstruction
and more specifically
http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Talairach
Hope some of that may lead you to successful reconstruction.
Best,
Martin