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Dear Freesurfer experts,
I'm trying to run a simulation (--> mri_glmfit-sim) with cached LGI data (fwhm10), but get an error due to the estimated fwhm kernel. The folder corresponding to the fwhm value (-->37) does not exist, I guess because it's a pretty unusual value...?
DoSim = 0 UseCache = 1 DoPoll = 0 DoPBSubmit = 0 DoBackground = 0 DiagCluster = 0 gd2mtx = dods fwhm = 36.855100 ERROR: cannot find /apps/prod/x86_64/freesurfer-6.0.1/average/mult-comp-cor/fsaverage/lh/cortex/fwhm37/abs/th20/mc-z.csd
I've seen mails describing similar issues in the archive and from your explanation I more or less understand that you cannot define this value as it is estimated in the process...? However, I did not see if there is a solution to this problem. What could I do about it now?
I attached the logfiles and would be very grateful for your help,
thanks a lot and stay healthy,
Doro