External Email - Use Caution
Dear Anna,
You should use 'setenv' (for tcsh and related shells) or 'export' (for BASH) when defining environment variables, as listed here:
https://secure-web.cisco.com/10e4snIgzUxrLukGTpLLWEbQgYzRweBims_84Fu3AbnlVO2...
E.g.:
setenv FREESURFER_HOME /Applications/freesurfer/7.2.0
You should also source (instead of executing) the SetUpFreeSurfer.csh script:
source $FREESURFER_HOME/SetUpFreeSurfer.csh
Best,
Tim
On 02/17/2022 5:32 PM Pusok, Anna anna.pusok@yale.edu wrote:
External Email - Use Caution
Hi there, I hope this email finds you well! I ran into some issues when I tried to use freesurfer. This is the error message I get in my terminal. Could you help me with this issue? If we could set up a Zoom meeting to discuss the issue, that would be helpful as well! Thank you, Anna _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1I_DTz03iuxlvttA0gpsm6ZexVkTMYw0e8NgZau7VrNkjD-...
-- Dr. Tim Schäfer Postdoc Computational Neuroimaging Department of Child and Adolescent Psychiatry, Psychosomatics and Psychotherapy University Hospital Frankfurt, Goethe University Frankfurt am Main, Germany