22 May
2012
22 May
'12
8:08 p.m.
Hi Navid,
I think mris_convert will take a .vtk file as input. Try it and see if it works:
mris_convert lh.pial.vtk lh.pial mris_convert lh.white.vtk lh.white
you can then use mris_thickness to calculate the thickness measures.
cheers Bruce
On Tue, 22 May 2012, Navid Shiee wrote:
Hi,
I have generated inner and pial surfaces using another method. However, I am interested in computing the cortical thickness using the method implemented in Freesurfer. My surfaces are in vtk format. I was wondering how I can do this, if this is at all possible.
Thanks,
-- Navid Shiee