Hi Derin,
mris_anatomical_status gives you only cortical gray matter.
cheers, Bruce
On Mon, 10 Jul 2006 derin@conte.wustl.edu wrote:
Hi,
I am attempting to assess (& compare) total cortical gray matter volume in a series of subjects (schiz vs. control), and was wondering if the tabular mris_anatomical_stats gm output consisted of only cortical gm, or included subcortical and other nuclei as well. I've searched the wiki, articles, and listserve archive with not much success; I get the sense that it is, but want to make sure. Additionally, what is shown in the ?h.ribbon.mgz files appears to be exactly what I am looking for. Is there any way to run the mris_anatomical_stats command on these files (use mris_convert maybe)? Thanks in advance.
-Derin
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer