Hi,
I am trying to run a Monte Carlo simulation on functional data constrained to a label using Freesurfer 4.0.1. I did not use Qdec for data analysis.
Looking at a previous post - https://mail.nmr.mgh.harvard.edu/pipermail//freesurfer/2010-November/016290.... - I see that I should: 1) constrain when running mri_glmfit, then 2) use mri_glmfit-sim (as opposed to running mri_glmfit with the simulation options).
I have done step 1, however when I try to mri_glmfit-sim, I receive a "command not found" message. Is mri_glmfit-sim not available in 4.0.1? Can I copy a workable version of mri_glmfit-sim into 4.0.1?
Thanks,
Susan McLaughlin Doctoral Candidate SPACE Lab (Stimulus-Parametric Imaging of Auditory Cortex) Dept. of Speech and Hearing Sciences University of Washington