Re: [Freesurfer] edits not effective

Is there a reason why you don't want to use the talairach.xfm? MNI mritotal does a reasonable job when the image is a good T1 volume.

Making mri_fill work is best done by using the talairach.xfm.

Tosa

Yasunari Tosa, Ph.D. Email: tosa@nmr.mgh.harvard.edu NMR Ctr, Mass. General Hospital TEL: 617-726-4050 Building 149, 13th Street Charlestown, MA 02129 USA

Kevin DeSimone wrote:

evelina et al --

The subject's brain has not been transformed to talairach space. The logs say talairach.xfm not found (ignored). I input "volume indices" for the cutting planes. Am I doing anything wrong?

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